| Tool name | RTPrimerdb |
|---|
| URL | http://www.rtprimerdb.org/ |
|---|
| Important features | 1. It is a database that holds primers and probes used for real time PCR assay.
2. There are 8606 real time PCR assays detailing 5928 genes. |
|---|
| Citations | Steve Lefever, Jo Vandesompele, Frank Speleman and Filip Pattyn: RTPrimerDB: the portal for real-time PCR primers and probes. Nucleic Acids Research. 2008 Oct 8;37(1):D942-D945. PubMed PMID: 18948285; PubMed Central PMCID: PMC2686610 |
|---|
| Year of publication | 2009 |
|---|
| Rank by usage frequency | 100 |
|---|
| Comments | There are two older version of this database. One is 2003 version and other is 2006 version |
|---|
| Function | Mutational analysis, SNP primers, Microarray probes, Real time PCR, Primer Database |
|---|
| Category | Online/downloadable , Free |
|---|
| Features | 1. It is a database of primers and probes used for real time PCR assay. Each of these primer sets and probes are submitted by other users.
2. There are primers for different application such as gene expression quantification and/or detection, SNP detection, mutation analysis, DNA copy number quantification or deletion, fusion gene quantification or deletion and chromatin immunoprecipitation (ChIP).
3. There are 8606 real time PCR assays submitted comprising 5928 genes. |
|---|
| Description | |
|---|
